Construct: shRNA TRCN0000066166

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016685.1-530s1c1
DNA Barcode:
CAAACAAGTTTGCACGGATAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Comp (12845)
Gene Description:
cartilage oligomeric matrix protein
Transcript:
RefSeq NM_016685.1 (NON-CURRENT)
Match location:
Position 530 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000066166)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAACAAGTTTGCACGGATAT
Hairpin Sequence:
5'-CCGG-CAAACAAGTTTGCACGGATAT-CTCGAG-ATATCCGTGCAAACTTGTTTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAACAAGTTTGCACGGATATCTCGAGATATCCGTGCAAACTTGTTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAACAAGTTTGCACGGATATCTCGAGATATCCGTGCAAACTTGTTTG-3'

Other clones with same target sequence:

(none)