Construct: shRNA TRCN0000068791

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_129721.4-2398s1c1
DNA Barcode:
CCAGATCAGTTCTCAAAGAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Slc9a2 (226999)
Gene Description:
solute carrier family 9 (sodium/hydrogen exchanger), member 2
Transcript:
RefSeq XM_129721.4 (NON-CURRENT)
Match location:
Position 2398 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000068791)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGATCAGTTCTCAAAGAAA
Hairpin Sequence:
5'-CCGG-CCAGATCAGTTCTCAAAGAAA-CTCGAG-TTTCTTTGAGAACTGATCTGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGATCAGTTCTCAAAGAAACTCGAGTTTCTTTGAGAACTGATCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGATCAGTTCTCAAAGAAACTCGAGTTTCTTTGAGAACTGATCTGG-3'

Other clones with same target sequence:

(none)