Construct: shRNA TRCN0000069029

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009135.1-3410s1c1
DNA Barcode:
GCGTGTTTCTAGTCTGCCTAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Scn7a (20272)
Gene Description:
sodium channel, voltage-gated, type VII, alpha
Transcript:
RefSeq NM_009135.1 (NON-CURRENT)
Match location:
Position 3410 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000069029)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCGTGTTTCTAGTCTGCCTAA
Hairpin Sequence:
5'-CCGG-GCGTGTTTCTAGTCTGCCTAA-CTCGAG-TTAGGCAGACTAGAAACACGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCGTGTTTCTAGTCTGCCTAACTCGAGTTAGGCAGACTAGAAACACGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCGTGTTTCTAGTCTGCCTAACTCGAGTTAGGCAGACTAGAAACACGC-3'

Other clones with same target sequence:

(none)