Construct: shRNA TRCN0000069147
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_483973.1-681s1c1
- DNA Barcode:
- CCAAACATGGTCAGGGATGTT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- LOC544750 (544750)
- Gene Description:
- similar to Potassium voltage-gated channel subfamily C member 2 (Voltage-gated potassium channel subunit Kv3.2) (KSHIIIA)
- Transcript:
- RefSeq XM_483973.1 (NON-CURRENT)
- Match location:
- Position 681 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000069147)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAAACATGGTCAGGGATGTT
- Hairpin Sequence:
-
5'-CCGG-CCAAACATGGTCAGGGATGTT-CTCGAG-AACATCCCTGACCATGTTTGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAAACATGGTCAGGGATGTTCTCGAGAACATCCCTGACCATGTTTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAAACATGGTCAGGGATGTTCTCGAGAACATCCCTGACCATGTTTGG-3'
Other clones with same target sequence:
(none)
