Construct: shRNA TRCN0000069656

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_136435.2-475s1c1
DNA Barcode:
GCCTTTGAGCAGACCAAGTAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
LOC240711 (240711)
Gene Description:
similar to Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein (P-Rex1 protein)
Transcript:
RefSeq XM_136435.2 (NON-CURRENT)
Match location:
Position 475 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000069656)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTTTGAGCAGACCAAGTAT
Hairpin Sequence:
5'-CCGG-GCCTTTGAGCAGACCAAGTAT-CTCGAG-ATACTTGGTCTGCTCAAAGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTTTGAGCAGACCAAGTATCTCGAGATACTTGGTCTGCTCAAAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTTTGAGCAGACCAAGTATCTCGAGATACTTGGTCTGCTCAAAGGC-3'

Other clones with same target sequence:

(none)