Construct: shRNA TRCN0000070004

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_358370.1-437s1c1
DNA Barcode:
CCCAAACTGAAGCAGGTGTTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Trpm1 (17364)
Gene Description:
transient receptor potential cation channel, subfamily M, member 1
Transcript:
RefSeq XM_358370.1 (NON-CURRENT)
Match location:
Position 437 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000070004)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCAAACTGAAGCAGGTGTTT
Hairpin Sequence:
5'-CCGG-CCCAAACTGAAGCAGGTGTTT-CTCGAG-AAACACCTGCTTCAGTTTGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCAAACTGAAGCAGGTGTTTCTCGAGAAACACCTGCTTCAGTTTGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCAAACTGAAGCAGGTGTTTCTCGAGAAACACCTGCTTCAGTTTGGG-3'

Other clones with same target sequence:

(none)