Construct: shRNA TRCN0000070266

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011977.2-2056s1c1
DNA Barcode:
GCTCTTCTTTCTAGACCTGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Slc27a1 (26457)
Gene Description:
solute carrier family 27 (fatty acid transporter), member 1
Transcript:
RefSeq NM_011977.2 (NON-CURRENT)
Match location:
Position 2056 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000070266)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTCTTCTTTCTAGACCTGAA
Hairpin Sequence:
5'-CCGG-GCTCTTCTTTCTAGACCTGAA-CTCGAG-TTCAGGTCTAGAAAGAAGAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTCTTCTTTCTAGACCTGAACTCGAGTTCAGGTCTAGAAAGAAGAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTCTTCTTTCTAGACCTGAACTCGAGTTCAGGTCTAGAAAGAAGAGC-3'

Other clones with same target sequence:

(none)