Construct: shRNA TRCN0000070306
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_177870.2-848s1c1
- DNA Barcode:
- CTCCGCTTCAATAAAGCAGTT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Slc5a6 (330064)
- Gene Description:
- solute carrier family 5 (sodium-dependent vitamin transporter), member 6
- Transcript:
- RefSeq NM_177870.2 (NON-CURRENT)
- Match location:
- Position 848 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000070306)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CTCCGCTTCAATAAAGCAGTT
- Hairpin Sequence:
-
5'-CCGG-CTCCGCTTCAATAAAGCAGTT-CTCGAG-AACTGCTTTATTGAAGCGGAG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCTCCGCTTCAATAAAGCAGTTCTCGAGAACTGCTTTATTGAAGCGGAGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACTCCGCTTCAATAAAGCAGTTCTCGAGAACTGCTTTATTGAAGCGGAG-3'
Other clones with same target sequence:
(none)
