Construct: shRNA TRCN0000072039

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_031195.1-67s1c1
DNA Barcode:
GCAGTTCAGAATCCGTGAAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Msr1 (20288)
Gene Description:
macrophage scavenger receptor 1
Transcript:
RefSeq NM_031195.1 (NON-CURRENT)
Match location:
Position 67 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000072039)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGTTCAGAATCCGTGAAAT
Hairpin Sequence:
5'-CCGG-GCAGTTCAGAATCCGTGAAAT-CTCGAG-ATTTCACGGATTCTGAACTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGTTCAGAATCCGTGAAATCTCGAGATTTCACGGATTCTGAACTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGTTCAGAATCCGTGAAATCTCGAGATTTCACGGATTCTGAACTGC-3'

Other clones with same target sequence:

(none)