Construct: shRNA TRCN0000073920

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000285.1-564s1c1
DNA Barcode:
GCCGAGTGTTTAAGACGGATA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PEPD (5184)
Gene Description:
peptidase D
Transcript:
RefSeq NM_000285.1 (NON-CURRENT)
Match location:
Position 564 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000073920)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCGAGTGTTTAAGACGGATA
Hairpin Sequence:
5'-CCGG-GCCGAGTGTTTAAGACGGATA-CTCGAG-TATCCGTCTTAAACACTCGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCGAGTGTTTAAGACGGATACTCGAGTATCCGTCTTAAACACTCGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCGAGTGTTTAAGACGGATACTCGAGTATCCGTCTTAAACACTCGGC-3'

Other clones with same target sequence:

(none)