Construct: shRNA TRCN0000076135
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_025983.2-236s1c1
- DNA Barcode:
- GAAAGTCTCGAAGAAGGAGTA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Atp5e (67126)
- Gene Description:
- ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
- Transcript:
- RefSeq NM_025983.2 (NON-CURRENT)
- Match location:
- Position 236 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000076135)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GAAAGTCTCGAAGAAGGAGTA
- Hairpin Sequence:
-
5'-CCGG-GAAAGTCTCGAAGAAGGAGTA-CTCGAG-TACTCCTTCTTCGAGACTTTC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGAAAGTCTCGAAGAAGGAGTACTCGAGTACTCCTTCTTCGAGACTTTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGAAAGTCTCGAAGAAGGAGTACTCGAGTACTCCTTCTTCGAGACTTTC-3'
Other clones with same target sequence:
-
TRCN0000334639
