Construct: shRNA TRCN0000078383
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_003729.1-1279s1c1
- DNA Barcode:
- GCCTCTTAAATGATACCTCAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- RTCA (8634)
- Gene Description:
- RNA 3'-terminal phosphate cyclase
- Transcript:
- RefSeq NM_003729.1 (NON-CURRENT)
- Match location:
- Position 1279 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000078383)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCTCTTAAATGATACCTCAT
- Hairpin Sequence:
-
5'-CCGG-GCCTCTTAAATGATACCTCAT-CTCGAG-ATGAGGTATCATTTAAGAGGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCTCTTAAATGATACCTCATCTCGAGATGAGGTATCATTTAAGAGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCTCTTAAATGATACCTCATCTCGAGATGAGGTATCATTTAAGAGGC-3'
Other clones with same target sequence:
(none)
