Construct: shRNA TRCN0000078728
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_147129.2-3289s1c1
- DNA Barcode:
- CGCTGTAAAGGACCTTCCATT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- ALS2CL (259173)
- Gene Description:
- ALS2 C-terminal like
- Transcript:
- RefSeq NM_147129.2 (NON-CURRENT)
- Match location:
- Position 3289 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000078728)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CGCTGTAAAGGACCTTCCATT
- Hairpin Sequence:
-
5'-CCGG-CGCTGTAAAGGACCTTCCATT-CTCGAG-AATGGAAGGTCCTTTACAGCG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCGCTGTAAAGGACCTTCCATTCTCGAGAATGGAAGGTCCTTTACAGCGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACGCTGTAAAGGACCTTCCATTCTCGAGAATGGAAGGTCCTTTACAGCG-3'
Other clones with same target sequence:
(none)
