Construct: shRNA TRCN0000079423
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_011990.1-2004s1c1
- DNA Barcode:
- GCAAGCTAATATGCAAGTCAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Slc7a11 (26570)
- Gene Description:
- solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
- Transcript:
- RefSeq NM_011990.1 (NON-CURRENT)
- Match location:
- Position 2004 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000079423)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCAAGCTAATATGCAAGTCAT
- Hairpin Sequence:
-
5'-CCGG-GCAAGCTAATATGCAAGTCAT-CTCGAG-ATGACTTGCATATTAGCTTGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCAAGCTAATATGCAAGTCATCTCGAGATGACTTGCATATTAGCTTGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCAAGCTAATATGCAAGTCATCTCGAGATGACTTGCATATTAGCTTGC-3'
Other clones with same target sequence:
-
TRCN0000324192
