Construct: shRNA TRCN0000080973
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_026295.2-3311s1c1
- DNA Barcode:
- CCAGTAAGATTTAGAGAGCAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Ctdp1 (67655)
- Gene Description:
- CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
- Transcript:
- RefSeq NM_026295.2 (CURRENT)
- Match location:
- Position 3311 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000080973)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAGTAAGATTTAGAGAGCAA
- Hairpin Sequence:
-
5'-CCGG-CCAGTAAGATTTAGAGAGCAA-CTCGAG-TTGCTCTCTAAATCTTACTGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAGTAAGATTTAGAGAGCAACTCGAGTTGCTCTCTAAATCTTACTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAGTAAGATTTAGAGAGCAACTCGAGTTGCTCTCTAAATCTTACTGG-3'
Other clones with same target sequence:
-
TRCN0000324821
