Construct: shRNA TRCN0000081071

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_358362.2-543s1c1
DNA Barcode:
CAGTGGAAATAAATCTCACTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ptprz1 (19283)
Gene Description:
protein tyrosine phosphatase, receptor type Z, polypeptide 1
Transcript:
RefSeq XM_358362.2 (NON-CURRENT)
Match location:
Position 543 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000081071)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGTGGAAATAAATCTCACTA
Hairpin Sequence:
5'-CCGG-CAGTGGAAATAAATCTCACTA-CTCGAG-TAGTGAGATTTATTTCCACTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGTGGAAATAAATCTCACTACTCGAGTAGTGAGATTTATTTCCACTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGTGGAAATAAATCTCACTACTCGAGTAGTGAGATTTATTTCCACTG-3'

Other clones with same target sequence:

(none)