Construct: shRNA TRCN0000081393
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_135153.5-3979s1c1
- DNA Barcode:
- CCTTGAACTTACCTGGTTTAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Ppp2r3a (235542)
- Gene Description:
- protein phosphatase 2, regulatory subunit B'', alpha
- Transcript:
- RefSeq XM_135153.5 (NON-CURRENT)
- Match location:
- Position 3979 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000081393)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTTGAACTTACCTGGTTTAA
- Hairpin Sequence:
-
5'-CCGG-CCTTGAACTTACCTGGTTTAA-CTCGAG-TTAAACCAGGTAAGTTCAAGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTTGAACTTACCTGGTTTAACTCGAGTTAAACCAGGTAAGTTCAAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTTGAACTTACCTGGTTTAACTCGAGTTAAACCAGGTAAGTTCAAGG-3'
Other clones with same target sequence:
(none)
