Construct: shRNA TRCN0000081952

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_146131.1-1652s1c1
DNA Barcode:
CGGACGAATCTGGGAGCAGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Pbxip1 (229534)
Gene Description:
pre B cell leukemia transcription factor interacting protein 1
Transcript:
RefSeq NM_146131.1 (NON-CURRENT)
Match location:
Position 1652 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000081952)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGGACGAATCTGGGAGCAGAA
Hairpin Sequence:
5'-CCGG-CGGACGAATCTGGGAGCAGAA-CTCGAG-TTCTGCTCCCAGATTCGTCCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGGACGAATCTGGGAGCAGAACTCGAGTTCTGCTCCCAGATTCGTCCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGGACGAATCTGGGAGCAGAACTCGAGTTCTGCTCCCAGATTCGTCCG-3'

Other clones with same target sequence:

(none)