Construct: shRNA TRCN0000082837
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_000495.3-4025s1c1
- DNA Barcode:
- CCTGGAAATGGAGGTATTAAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- COL4A5 (1287)
- Gene Description:
- collagen type IV alpha 5 chain
- Transcript:
- RefSeq NM_000495.3 (NON-CURRENT)
- Match location:
- Position 4025 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000082837)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTGGAAATGGAGGTATTAAA
- Hairpin Sequence:
-
5'-CCGG-CCTGGAAATGGAGGTATTAAA-CTCGAG-TTTAATACCTCCATTTCCAGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTGGAAATGGAGGTATTAAACTCGAGTTTAATACCTCCATTTCCAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTGGAAATGGAGGTATTAAACTCGAGTTTAATACCTCCATTTCCAGG-3'
Other clones with same target sequence:
(none)
