Construct: shRNA TRCN0000082917

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_012130.2-276s1c1
DNA Barcode:
CCTACCTGAAAGGGCTCTGGA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CLDN14 (23562)
Gene Description:
claudin 14
Transcript:
RefSeq NM_012130.2 (NON-CURRENT)
Match location:
Position 276 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000082917)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTACCTGAAAGGGCTCTGGA
Hairpin Sequence:
5'-CCGG-CCTACCTGAAAGGGCTCTGGA-CTCGAG-TCCAGAGCCCTTTCAGGTAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTACCTGAAAGGGCTCTGGACTCGAGTCCAGAGCCCTTTCAGGTAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTACCTGAAAGGGCTCTGGACTCGAGTCCAGAGCCCTTTCAGGTAGG-3'

Other clones with same target sequence:

(none)