Construct: shRNA TRCN0000083194

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000380.2-660s1c1
DNA Barcode:
GCATTAGAAGAAGCAAAGGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
XPA (7507)
Gene Description:
XPA, DNA damage recognition and repair factor
Transcript:
RefSeq NM_000380.2 (NON-CURRENT)
Match location:
Position 660 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000083194)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCATTAGAAGAAGCAAAGGAA
Hairpin Sequence:
5'-CCGG-GCATTAGAAGAAGCAAAGGAA-CTCGAG-TTCCTTTGCTTCTTCTAATGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCATTAGAAGAAGCAAAGGAACTCGAGTTCCTTTGCTTCTTCTAATGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCATTAGAAGAAGCAAAGGAACTCGAGTTCCTTTGCTTCTTCTAATGC-3'

Other clones with same target sequence:

(none)