Construct: shRNA TRCN0000084033
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_015087.3-2124s1c1
- DNA Barcode:
- GCCTTATGAAATGGATGAAAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- SPART (23111)
- Gene Description:
- spartin
- Transcript:
- RefSeq NM_015087.3 (NON-CURRENT)
- Match location:
- Position 2124 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000084033)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCTTATGAAATGGATGAAAT
- Hairpin Sequence:
-
5'-CCGG-GCCTTATGAAATGGATGAAAT-CTCGAG-ATTTCATCCATTTCATAAGGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCTTATGAAATGGATGAAATCTCGAGATTTCATCCATTTCATAAGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCTTATGAAATGGATGAAATCTCGAGATTTCATCCATTTCATAAGGC-3'
Other clones with same target sequence:
-
TRCN0000300009
