Construct: shRNA TRCN0000084038

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007216.3-4449s1c1
DNA Barcode:
CCCACAAGAATCATGCACTTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
HPS5 (11234)
Gene Description:
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2
Transcript:
RefSeq NM_007216.3 (NON-CURRENT)
Match location:
Position 4449 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000084038)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCACAAGAATCATGCACTTT
Hairpin Sequence:
5'-CCGG-CCCACAAGAATCATGCACTTT-CTCGAG-AAAGTGCATGATTCTTGTGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCACAAGAATCATGCACTTTCTCGAGAAAGTGCATGATTCTTGTGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCACAAGAATCATGCACTTTCTCGAGAAAGTGCATGATTCTTGTGGG-3'

Other clones with same target sequence:

(none)