Construct: shRNA TRCN0000084095

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_013236.1-904s1c1
DNA Barcode:
CCCAAACTGAACAATCAAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ATXN10 (25814)
Gene Description:
ataxin 10
Transcript:
RefSeq NM_013236.1 (NON-CURRENT)
Match location:
Position 904 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000084095)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCAAACTGAACAATCAAGAA
Hairpin Sequence:
5'-CCGG-CCCAAACTGAACAATCAAGAA-CTCGAG-TTCTTGATTGTTCAGTTTGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCAAACTGAACAATCAAGAACTCGAGTTCTTGATTGTTCAGTTTGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCAAACTGAACAATCAAGAACTCGAGTTCTTGATTGTTCAGTTTGGG-3'

Other clones with same target sequence:

  1. TRCN0000287029