Construct: shRNA TRCN0000084882

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_019732.1-678s1c1
DNA Barcode:
CAGGTTCAACGACCTTCGATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Runx3 (12399)
Gene Description:
runt related transcription factor 3
Transcript:
RefSeq NM_019732.1 (NON-CURRENT)
Match location:
Position 678 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000084882)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGGTTCAACGACCTTCGATT
Hairpin Sequence:
5'-CCGG-CAGGTTCAACGACCTTCGATT-CTCGAG-AATCGAAGGTCGTTGAACCTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGGTTCAACGACCTTCGATTCTCGAGAATCGAAGGTCGTTGAACCTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGGTTCAACGACCTTCGATTCTCGAGAATCGAAGGTCGTTGAACCTG-3'

Other clones with same target sequence:

(none)