Construct: shRNA TRCN0000084923

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_027477.1-2360s1c1
DNA Barcode:
GCAGAGTTACAAAGCAAGATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Zfp398 (272347)
Gene Description:
zinc finger protein 398
Transcript:
RefSeq NM_027477.1 (NON-CURRENT)
Match location:
Position 2360 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000084923)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGAGTTACAAAGCAAGATA
Hairpin Sequence:
5'-CCGG-GCAGAGTTACAAAGCAAGATA-CTCGAG-TATCTTGCTTTGTAACTCTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGAGTTACAAAGCAAGATACTCGAGTATCTTGCTTTGTAACTCTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGAGTTACAAAGCAAGATACTCGAGTATCTTGCTTTGTAACTCTGC-3'

Other clones with same target sequence:

(none)