Construct: shRNA TRCN0000086860

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_122700.3-525s1c1
DNA Barcode:
GCCCAGTGACACCATCGAGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Gm1821 (218963)
Gene Description:
predicted gene 1821; ubiquitin pseudogene
Transcript:
RefSeq XM_122700.3 (NON-CURRENT)
Match location:
Position 525 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000086860)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCCAGTGACACCATCGAGAA
Hairpin Sequence:
5'-CCGG-GCCCAGTGACACCATCGAGAA-CTCGAG-TTCTCGATGGTGTCACTGGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCCAGTGACACCATCGAGAACTCGAGTTCTCGATGGTGTCACTGGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCCAGTGACACCATCGAGAACTCGAGTTCTCGATGGTGTCACTGGGC-3'

Other clones with same target sequence:

(none)