Construct: shRNA TRCN0000087135
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_484760.1-271s1c1
- DNA Barcode:
- GCATGTTACTTCTGCCTAGAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- LOC433213 (433213)
- Gene Description:
- hypothetical LOC433213
- Transcript:
- RefSeq XM_484760.1 (NON-CURRENT)
- Match location:
- Position 271 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000087135)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCATGTTACTTCTGCCTAGAA
- Hairpin Sequence:
-
5'-CCGG-GCATGTTACTTCTGCCTAGAA-CTCGAG-TTCTAGGCAGAAGTAACATGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCATGTTACTTCTGCCTAGAACTCGAGTTCTAGGCAGAAGTAACATGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCATGTTACTTCTGCCTAGAACTCGAGTTCTAGGCAGAAGTAACATGC-3'
Other clones with same target sequence:
(none)
