Construct: shRNA TRCN0000087239

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_149029.3-275s1c1
DNA Barcode:
GACAAGATCATTCAGTTCATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Gm555 (215415)
Gene Description:
predicted gene 555
Transcript:
RefSeq XM_149029.3 (NON-CURRENT)
Match location:
Position 275 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000087239)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GACAAGATCATTCAGTTCATA
Hairpin Sequence:
5'-CCGG-GACAAGATCATTCAGTTCATA-CTCGAG-TATGAACTGAATGATCTTGTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGACAAGATCATTCAGTTCATACTCGAGTATGAACTGAATGATCTTGTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGACAAGATCATTCAGTTCATACTCGAGTATGAACTGAATGATCTTGTC-3'

Other clones with same target sequence:

(none)