Construct: shRNA TRCN0000087686

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_133663.3-1703s1c1
DNA Barcode:
GCCGCCATTGAGATGCTTCTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ubqln5 (70980)
Gene Description:
ubiquilin 5
Transcript:
RefSeq XM_133663.3 (NON-CURRENT)
Match location:
Position 1703 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000087686)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCGCCATTGAGATGCTTCTA
Hairpin Sequence:
5'-CCGG-GCCGCCATTGAGATGCTTCTA-CTCGAG-TAGAAGCATCTCAATGGCGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCGCCATTGAGATGCTTCTACTCGAGTAGAAGCATCTCAATGGCGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCGCCATTGAGATGCTTCTACTCGAGTAGAAGCATCTCAATGGCGGC-3'

Other clones with same target sequence:

(none)