Construct: shRNA TRCN0000088442

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_488373.1-626s1c1
DNA Barcode:
GAGCCAGATTTGTGGTGGAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
LOC436226 (436226)
Gene Description:
similar to prohibitin
Transcript:
RefSeq XM_488373.1 (NON-CURRENT)
Match location:
Position 626 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000088442)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAGCCAGATTTGTGGTGGAAA
Hairpin Sequence:
5'-CCGG-GAGCCAGATTTGTGGTGGAAA-CTCGAG-TTTCCACCACAAATCTGGCTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAGCCAGATTTGTGGTGGAAACTCGAGTTTCCACCACAAATCTGGCTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAGCCAGATTTGTGGTGGAAACTCGAGTTTCCACCACAAATCTGGCTC-3'

Other clones with same target sequence:

(none)