Construct: shRNA TRCN0000088480

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_198094.1-2089s1c1
DNA Barcode:
GCGGCAGCTAAGTCTAGATAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Brd4 (57261)
Gene Description:
bromodomain containing 4
Transcript:
RefSeq NM_198094.1 (NON-CURRENT)
Match location:
Position 2089 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000088480)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCGGCAGCTAAGTCTAGATAT
Hairpin Sequence:
5'-CCGG-GCGGCAGCTAAGTCTAGATAT-CTCGAG-ATATCTAGACTTAGCTGCCGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCGGCAGCTAAGTCTAGATATCTCGAGATATCTAGACTTAGCTGCCGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCGGCAGCTAAGTCTAGATATCTCGAGATATCTAGACTTAGCTGCCGC-3'

Other clones with same target sequence:

  1. TRCN0000311977