Construct: shRNA TRCN0000088533

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_133901.2-4727s1c1
DNA Barcode:
CGGGAGGCAGAGGCAGGCAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Trrap (100683)
Gene Description:
transformation/transcription domain-associated protein
Transcript:
RefSeq NM_133901.2 (NON-CURRENT)
Match location:
Position 4727 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000088533)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGGGAGGCAGAGGCAGGCAAT
Hairpin Sequence:
5'-CCGG-CGGGAGGCAGAGGCAGGCAAT-CTCGAG-ATTGCCTGCCTCTGCCTCCCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGGGAGGCAGAGGCAGGCAATCTCGAGATTGCCTGCCTCTGCCTCCCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGGGAGGCAGAGGCAGGCAATCTCGAGATTGCCTGCCTCTGCCTCCCG-3'

Other clones with same target sequence:

(none)