Construct: shRNA TRCN0000088642

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_019809.1-761s1c1
DNA Barcode:
AGGGTGACATTAAGCAGCAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Pdlim5 (56376)
Gene Description:
PDZ and LIM domain 5
Transcript:
RefSeq NM_019809.1 (NON-CURRENT)
Match location:
Position 761 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000088642)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGGGTGACATTAAGCAGCAAA
Hairpin Sequence:
5'-CCGG-AGGGTGACATTAAGCAGCAAA-CTCGAG-TTTGCTGCTTAATGTCACCCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGGGTGACATTAAGCAGCAAACTCGAGTTTGCTGCTTAATGTCACCCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGGGTGACATTAAGCAGCAAACTCGAGTTTGCTGCTTAATGTCACCCT-3'

Other clones with same target sequence:

(none)