Construct: shRNA TRCN0000088676

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_485801.2-865s1c1
DNA Barcode:
CGACACTATAGCCCAGAAGAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
LOC545863 (545863)
Gene Description:
similar to AP2 associated kinase 1
Transcript:
RefSeq XM_485801.2 (NON-CURRENT)
Match location:
Position 865 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000088676)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGACACTATAGCCCAGAAGAT
Hairpin Sequence:
5'-CCGG-CGACACTATAGCCCAGAAGAT-CTCGAG-ATCTTCTGGGCTATAGTGTCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGACACTATAGCCCAGAAGATCTCGAGATCTTCTGGGCTATAGTGTCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGACACTATAGCCCAGAAGATCTCGAGATCTTCTGGGCTATAGTGTCG-3'

Other clones with same target sequence:

(none)