Construct: shRNA TRCN0000088773
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_026079.1-4541s1c1
- DNA Barcode:
- CCTCAGTTCCTGTTGTTCATA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Ikbkap (230233)
- Gene Description:
- inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein
- Transcript:
- RefSeq NM_026079.1 (NON-CURRENT)
- Match location:
- Position 4541 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000088773)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTCAGTTCCTGTTGTTCATA
- Hairpin Sequence:
-
5'-CCGG-CCTCAGTTCCTGTTGTTCATA-CTCGAG-TATGAACAACAGGAACTGAGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTCAGTTCCTGTTGTTCATACTCGAGTATGAACAACAGGAACTGAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTCAGTTCCTGTTGTTCATACTCGAGTATGAACAACAGGAACTGAGG-3'
Other clones with same target sequence:
-
TRCN0000302384
