Construct: shRNA TRCN0000089588
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_484743.1-1265s1c1
- DNA Barcode:
- GCTCAAGGGTGCTTGTCCCAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- LOC433196 (433196)
- Gene Description:
- similar to tubulin, alpha 1
- Transcript:
- RefSeq XM_484743.1 (NON-CURRENT)
- Match location:
- Position 1265 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000089588)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCTCAAGGGTGCTTGTCCCAA
- Hairpin Sequence:
-
5'-CCGG-GCTCAAGGGTGCTTGTCCCAA-CTCGAG-TTGGGACAAGCACCCTTGAGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCTCAAGGGTGCTTGTCCCAACTCGAGTTGGGACAAGCACCCTTGAGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCTCAAGGGTGCTTGTCCCAACTCGAGTTGGGACAAGCACCCTTGAGC-3'
Other clones with same target sequence:
(none)
