Construct: shRNA TRCN0000090551

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_008470.1-848s1c1
DNA Barcode:
GCCGCATTCTGAATGAGATGA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Krt16 (16666)
Gene Description:
keratin 16
Transcript:
RefSeq NM_008470.1 (CURRENT)
Match location:
Position 848 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000090551)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCGCATTCTGAATGAGATGA
Hairpin Sequence:
5'-CCGG-GCCGCATTCTGAATGAGATGA-CTCGAG-TCATCTCATTCAGAATGCGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCGCATTCTGAATGAGATGACTCGAGTCATCTCATTCAGAATGCGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCGCATTCTGAATGAGATGACTCGAGTCATCTCATTCAGAATGCGGC-3'

Other clones with same target sequence:

(none)