Construct: shRNA TRCN0000090929

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_621079.1-857s1c1
DNA Barcode:
GCCATGGGATTGGCATACATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cldn34c1 (73061)
Gene Description:
claudin 34C1
Transcript:
RefSeq XM_621079.1 (NON-CURRENT)
Match location:
Position 857 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000090929)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCATGGGATTGGCATACATA
Hairpin Sequence:
5'-CCGG-GCCATGGGATTGGCATACATA-CTCGAG-TATGTATGCCAATCCCATGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCATGGGATTGGCATACATACTCGAGTATGTATGCCAATCCCATGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCATGGGATTGGCATACATACTCGAGTATGTATGCCAATCCCATGGC-3'

Other clones with same target sequence:

(none)