Construct: shRNA TRCN0000090938

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_486674.2-364s1c1
DNA Barcode:
CCCTGGCAAATGTACACACTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
LOC434777 (434777)
Gene Description:
similar to gamma actin-like protein
Transcript:
RefSeq XM_486674.2 (NON-CURRENT)
Match location:
Position 364 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000090938)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCTGGCAAATGTACACACTT
Hairpin Sequence:
5'-CCGG-CCCTGGCAAATGTACACACTT-CTCGAG-AAGTGTGTACATTTGCCAGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCTGGCAAATGTACACACTTCTCGAGAAGTGTGTACATTTGCCAGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCTGGCAAATGTACACACTTCTCGAGAAGTGTGTACATTTGCCAGGG-3'

Other clones with same target sequence:

(none)