Construct: shRNA TRCN0000092217

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_485580.2-316s1c1
DNA Barcode:
TGGTGGATATTCCCACAAGCA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
LOC433861 (433861)
Gene Description:
similar to novel protein
Transcript:
RefSeq XM_485580.2 (NON-CURRENT)
Match location:
Position 316 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000092217)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TGGTGGATATTCCCACAAGCA
Hairpin Sequence:
5'-CCGG-TGGTGGATATTCCCACAAGCA-CTCGAG-TGCTTGTGGGAATATCCACCA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTGGTGGATATTCCCACAAGCACTCGAGTGCTTGTGGGAATATCCACCATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATGGTGGATATTCCCACAAGCACTCGAGTGCTTGTGGGAATATCCACCA-3'

Other clones with same target sequence:

(none)