Construct: shRNA TRCN0000092479
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_127466.6-454s1c1
- DNA Barcode:
- GCCGCAAGGAAGCTGAAGCAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Ube2ql1 (76980)
- Gene Description:
- ubiquitin-conjugating enzyme E2Q family-like 1
- Transcript:
- RefSeq XM_127466.6 (NON-CURRENT)
- Match location:
- Position 454 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000092479)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCGCAAGGAAGCTGAAGCAA
- Hairpin Sequence:
-
5'-CCGG-GCCGCAAGGAAGCTGAAGCAA-CTCGAG-TTGCTTCAGCTTCCTTGCGGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCGCAAGGAAGCTGAAGCAACTCGAGTTGCTTCAGCTTCCTTGCGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCGCAAGGAAGCTGAAGCAACTCGAGTTGCTTCAGCTTCCTTGCGGC-3'
Other clones with same target sequence:
(none)
