Construct: shRNA TRCN0000092715
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_486550.2-424s1c1
- DNA Barcode:
- GATAGAGTACAATGAGTCTAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- LOC434683 (434683)
- Gene Description:
- similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
- Transcript:
- RefSeq XM_486550.2 (NON-CURRENT)
- Match location:
- Position 424 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000092715)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GATAGAGTACAATGAGTCTAT
- Hairpin Sequence:
-
5'-CCGG-GATAGAGTACAATGAGTCTAT-CTCGAG-ATAGACTCATTGTACTCTATC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGATAGAGTACAATGAGTCTATCTCGAGATAGACTCATTGTACTCTATCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGATAGAGTACAATGAGTCTATCTCGAGATAGACTCATTGTACTCTATC-3'
Other clones with same target sequence:
(none)
