Construct: shRNA TRCN0000093020

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_175653.1-273s1c1
DNA Barcode:
GCGCTTCCAGAGCTCGGCTGT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hist1h3c (319148)
Gene Description:
histone cluster 1, H3c
Transcript:
RefSeq NM_175653.1 (NON-CURRENT)
Match location:
Position 273 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000093020)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCGCTTCCAGAGCTCGGCTGT
Hairpin Sequence:
5'-CCGG-GCGCTTCCAGAGCTCGGCTGT-CTCGAG-ACAGCCGAGCTCTGGAAGCGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCGCTTCCAGAGCTCGGCTGTCTCGAGACAGCCGAGCTCTGGAAGCGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCGCTTCCAGAGCTCGGCTGTCTCGAGACAGCCGAGCTCTGGAAGCGC-3'

Other clones with same target sequence:

(none)