Construct: shRNA TRCN0000093045

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016750.1-348s1c1
DNA Barcode:
CGTCACTTGCAGCTTGCTATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
H2afz (51788)
Gene Description:
H2A histone family, member Z
Transcript:
RefSeq NM_016750.1 (NON-CURRENT)
Match location:
Position 348 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000093045)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGTCACTTGCAGCTTGCTATA
Hairpin Sequence:
5'-CCGG-CGTCACTTGCAGCTTGCTATA-CTCGAG-TATAGCAAGCTGCAAGTGACG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGTCACTTGCAGCTTGCTATACTCGAGTATAGCAAGCTGCAAGTGACGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGTCACTTGCAGCTTGCTATACTCGAGTATAGCAAGCTGCAAGTGACG-3'

Other clones with same target sequence:

(none)