Construct: shRNA TRCN0000093686

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_175645.2-1588s1c1
DNA Barcode:
CCTGGAGTGTGATACACACAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Xylt1 (233781)
Gene Description:
xylosyltransferase 1
Transcript:
RefSeq NM_175645.2 (NON-CURRENT)
Match location:
Position 1588 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000093686)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGGAGTGTGATACACACAT
Hairpin Sequence:
5'-CCGG-CCTGGAGTGTGATACACACAT-CTCGAG-ATGTGTGTATCACACTCCAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGGAGTGTGATACACACATCTCGAGATGTGTGTATCACACTCCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGGAGTGTGATACACACATCTCGAGATGTGTGTATCACACTCCAGG-3'

Other clones with same target sequence:

(none)