Construct: shRNA TRCN0000095784
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_007958.1-4844s1c1
- DNA Barcode:
- GCCAGGAATTTGCAGGTGTTA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Smarcad1 (13990)
- Gene Description:
- SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
- Transcript:
- RefSeq NM_007958.1 (CURRENT)
- Match location:
- Position 4844 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000095784)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCAGGAATTTGCAGGTGTTA
- Hairpin Sequence:
-
5'-CCGG-GCCAGGAATTTGCAGGTGTTA-CTCGAG-TAACACCTGCAAATTCCTGGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCAGGAATTTGCAGGTGTTACTCGAGTAACACCTGCAAATTCCTGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCAGGAATTTGCAGGTGTTACTCGAGTAACACCTGCAAATTCCTGGC-3'
Other clones with same target sequence:
(none)
