Construct: shRNA TRCN0000097241

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011789.1-1239s1c1
DNA Barcode:
GCTGTCATTTGACGAAGAATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Apc2 (23805)
Gene Description:
adenomatosis polyposis coli 2
Transcript:
RefSeq NM_011789.1 (NON-CURRENT)
Match location:
Position 1239 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000097241)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTGTCATTTGACGAAGAATA
Hairpin Sequence:
5'-CCGG-GCTGTCATTTGACGAAGAATA-CTCGAG-TATTCTTCGTCAAATGACAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTGTCATTTGACGAAGAATACTCGAGTATTCTTCGTCAAATGACAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTGTCATTTGACGAAGAATACTCGAGTATTCTTCGTCAAATGACAGC-3'

Other clones with same target sequence:

(none)