Construct: shRNA TRCN0000097646

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_177386.2-783s1c1
DNA Barcode:
GCAAACCTTCTGGAAGGTGTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Sfmbt2 (353282)
Gene Description:
Scm-like with four mbt domains 2
Transcript:
RefSeq NM_177386.2 (NON-CURRENT)
Match location:
Position 783 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000097646)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAAACCTTCTGGAAGGTGTA
Hairpin Sequence:
5'-CCGG-GCAAACCTTCTGGAAGGTGTA-CTCGAG-TACACCTTCCAGAAGGTTTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAAACCTTCTGGAAGGTGTACTCGAGTACACCTTCCAGAAGGTTTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAAACCTTCTGGAAGGTGTACTCGAGTACACCTTCCAGAAGGTTTGC-3'

Other clones with same target sequence:

(none)