Construct: shRNA TRCN0000097687

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_010128.3-366s1c1
DNA Barcode:
CCTACGGCAATGAAGATGCTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Emp1 (13730)
Gene Description:
epithelial membrane protein 1
Transcript:
RefSeq NM_010128.3 (NON-CURRENT)
Match location:
Position 366 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000097687)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTACGGCAATGAAGATGCTA
Hairpin Sequence:
5'-CCGG-CCTACGGCAATGAAGATGCTA-CTCGAG-TAGCATCTTCATTGCCGTAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTACGGCAATGAAGATGCTACTCGAGTAGCATCTTCATTGCCGTAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTACGGCAATGAAGATGCTACTCGAGTAGCATCTTCATTGCCGTAGG-3'

Other clones with same target sequence:

  1. TRCN0000326444